Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

 Score =  119 bits (298), Expect = 1e-31
 Identities = 81/265 (30%), Positives = 139/265 (52%), Gaps = 7/265 (2%)

Query: 53  LYANPLTLKLFEADAQSLFGKTDH--DFFHDDQLSDILAADQQVFETRLSVIHEERAIAK 110
           +Y +P   ++F   A  L        D  + D L+    +  +V E + S+   E  I +
Sbjct: 69  IYVSPAYERIFGRSAGLLLADYSEWRDSIYPDDLNYAERSLNEVIE-KGSIEDREYRIIR 127

Query: 111 SNGLVRIYRAVKHPILHRV-TGEVIGLIGVSTDITDIVELREQLYQLANTDSLTQLCNRR 169
           ++G VR + + K  + HR    + + ++G++ DIT+  +L  +L +LA TD LTQ  NRR
Sbjct: 128 ADGEVR-WLSDKCFVSHRADASQRLIVVGIAEDITEKKQLENELQRLATTDVLTQSSNRR 186

Query: 170 KLWADFRAAFARAKRLRQPLSCISIDIDNFKLINDQFGHDKGDEVLCFLAKLFQSVISDH 229
             +   +  F  A+    PL+ + +DID+FKL+ND +GH +GD VL  +A+  +S +   
Sbjct: 187 HFFECAQREFELARLNGTPLAFLLLDIDDFKLVNDTYGHQEGDTVLQRIAESGRSALRRG 246

Query: 230 HFCGRVGGEEFIIVLENTHVETAFHLAEQIRQRFAEHPFFEQNEHIYLCA--GVSSLHHG 287
              GR+GGEEF  V      + A  +AE++++      F        + A  G+++L   
Sbjct: 247 DLFGRIGGEEFAAVFPGCAPDMAMQIAERLQREIQRQNFQSAGTTFSITASQGLTNLGPD 306

Query: 288 DHDIADIYRRSDQALYKAKRNGRNR 312
           D  +  +Y R+D A+Y+AKR G+N+
Sbjct: 307 DPSLETLYGRADAAMYQAKRQGKNQ 331