Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1047 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) from Synechococcus elongatus PCC 7942

 Score =  120 bits (300), Expect = 2e-31
 Identities = 84/287 (29%), Positives = 137/287 (47%), Gaps = 11/287 (3%)

Query: 32  HELVLNELGVYVFVKNRRGEYLYANPLTLKLFEADAQSLFGKTDHDFFHDDQLSDILAAD 91
           + L+   +   V +    G YLY +P    L    ++ + G+  +DFFH +    I    
Sbjct: 496 YRLLAENMNDLVCLHQADGTYLYVSPSAEALLGFSSEEMVGQNPYDFFHPEDCDRIRDEA 555

Query: 92  QQ--VFETRLSVIHEERAIAKSNGLVRIYRAVKHPILHRVTGEVIGLIGVSTDITDIVEL 149
            Q  +    L +++  R   K  G    +  +  PI+    G VIGL   S D+T  +E+
Sbjct: 556 HQAVLMGAELPIVYRMR---KKLGGYIWFETLTKPIMDD-QGVVIGLQTTSRDVTQRIEI 611

Query: 150 REQLYQLANTDSLTQLCNRRKLWADFRAAFARAKRLRQ-PLSCISIDIDNFKLINDQFGH 208
           + QL   A  DSLT L NR  L      +  R+KRL+    + + +D+D FK+IND  GH
Sbjct: 612 QNQLQYDACHDSLTGLANRNLLIERLELSLKRSKRLQNYKYAVLFLDLDRFKVINDSLGH 671

Query: 209 DKGDEVLCFLAKLFQSVISDHHFCGRVGGEEFIIVLENTHV-ETAFHLAEQIRQRFAEHP 267
             GD++L  +A+  QS+I  H    R+GG+EF++++E+    +    +AE+I     + P
Sbjct: 672 ITGDQLLVSIAQKLQSIIRSHDLAARLGGDEFVVLVEDIQTFDEPIKVAERILAAI-QVP 730

Query: 268 FFEQNEHIYLCAGVSSL--HHGDHDIADIYRRSDQALYKAKRNGRNR 312
              +   IY    +  +   H       + R +D A+Y+AK  GR R
Sbjct: 731 LELEERSIYTSTSIGIVFGSHEYESATQLLRDADTAMYRAKSRGRAR 777