Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) from Rhodospirillum rubrum S1H

 Score =  112 bits (281), Expect = 1e-29
 Identities = 68/190 (35%), Positives = 99/190 (52%), Gaps = 2/190 (1%)

Query: 125 ILHRVTGEVIGLIGVSTDITDIVELREQLYQLANTDSLTQLCNRRKLWADFRAAFARAKR 184
           +L    G+ +GL+ V TDIT+   + E L +LA TD LT   NRR      R   A A+R
Sbjct: 299 VLTDAAGQAVGLVAVITDITEQKRMEEALRRLATTDPLTGALNRRAFMEAARRDLALAQR 358

Query: 185 LRQPLSCISIDIDNFKLINDQFGHDKGDEVLCFLAKLFQSVISDHHFCGRVGGEEFIIVL 244
             +P++    DID+FK +NDQ GH  GDE L          +      GR+GGEEF ++L
Sbjct: 359 HGEPVTVALADIDHFKRVNDQHGHATGDEALKTFVATVHGALRASDVLGRMGGEEFALIL 418

Query: 245 ENTHVETAFHLAEQIRQRFA--EHPFFEQNEHIYLCAGVSSLHHGDHDIADIYRRSDQAL 302
            +T + +A  LA+++RQ  A    P         +  G++ L      I  + + +D+AL
Sbjct: 419 PHTALASAMLLADRLRQTLANLRVPCPSGEVEFTVSIGLAELGTHGTTIDTLLQAADEAL 478

Query: 303 YKAKRNGRNR 312
           Y+AK  GRNR
Sbjct: 479 YRAKSAGRNR 488