Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 820 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  101 bits (252), Expect = 6e-26
 Identities = 63/180 (35%), Positives = 99/180 (55%), Gaps = 3/180 (1%)

Query: 142 DITDIVELREQLYQLANTDSLTQLCNRRKLWADFRAAFARAKRLRQP-LSCISIDIDNFK 200
           D+TD   + ++L  LA  D LT L NRR  + D   A ARA R     ++ ISID+D FK
Sbjct: 361 DVTDRKAMIDRLTFLAQRDPLTGLINRRSFFDDLEKAVARAGRFPAAGVAVISIDLDRFK 420

Query: 201 LINDQFGHDKGDEVLCFLAKLFQSVISDHHFCGRVGGEEFIIVLENTHVETAFHLAEQIR 260
            +ND  GH  GD +L  +A++    + +     R+GG+EF ++L   + E A H+AE +R
Sbjct: 421 YVNDSLGHQAGDCLLKEVAEVLFGRLRETDLLARLGGDEFAVLLHGVNREGALHVAEALR 480

Query: 261 QRFAEHPFFEQNEHIYL-CA-GVSSLHHGDHDIADIYRRSDQALYKAKRNGRNRCCIYRQ 318
              A++ F    + + + C+ GV++      D  D+  R+D A+  AKR GRNR  ++ +
Sbjct: 481 LCLADYAFSYDGKSVEIGCSLGVATWAADVDDPEDLLARADMAMRLAKRAGRNRVHLFEE 540