Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score =  106 bits (265), Expect = 1e-27
 Identities = 69/171 (40%), Positives = 96/171 (56%), Gaps = 2/171 (1%)

Query: 142 DITDIVELREQLYQLANTDSLTQLCNRRKLWADFRAAFARAKRLRQPLSCISIDIDNFKL 201
           DIT   +  E   +LA TD LT L NRR L+       ARA+R   PLS + ID+D+FK 
Sbjct: 336 DITVHKQREEAWQRLALTDPLTGLGNRRLLFDRGILEVARARRGCWPLSGLMIDLDHFKR 395

Query: 202 INDQFGHDKGDEVLCFLAKLFQSVISDHHFCGRVGGEEFIIVLENTHVETAFHLAEQIRQ 261
           IND  GH  GD +L  LA   +  + +     RVGGEEF I+L +T +  A  + E++R 
Sbjct: 396 INDTQGHAAGDAILRTLADTLRESLREIDVIARVGGEEFAILLPDTSLTAAHEVGERLRL 455

Query: 262 RFAEHPFFEQNEHIYLCAGVSSLHHGDHDIADIYRRSDQALYKAKRNGRNR 312
              + P       + +  G+S+LH  D  + D+  R+D ALY+AKRNGR+R
Sbjct: 456 S-CQIP-QPVGGPVTISVGISTLHPEDRGLGDMLSRADDALYRAKRNGRDR 504