Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  107 bits (268), Expect = 6e-28
 Identities = 63/162 (38%), Positives = 91/162 (56%), Gaps = 4/162 (2%)

Query: 156 LANTDSLTQLCNRRKLWADFRAAFARAKRLRQPLSCISIDIDNFKLINDQFGHDKGDEVL 215
           LA TD LTQL NRR  ++     F       QPLS I  D D+FK +ND++GHD GD+VL
Sbjct: 488 LALTDHLTQLPNRRYTYSKGEGYFKSKDEGHQPLSIILFDADHFKKVNDKYGHDIGDKVL 547

Query: 216 CFLAKLFQSVISDHHFCGRVGGEEFIIVLENTHVETAFHLAEQIRQRFAEHPFFE--QNE 273
             LA +   ++      GRVGGEEF+++L  T  E A ++A+++        F +   N 
Sbjct: 548 IALANISNGLMRKQDLVGRVGGEEFLVILPGTTAEQALNVAQRLVTTVESSNFDDVYMNF 607

Query: 274 HIYLCAGVSSLHHGDHDIADIYRRSDQALYKAKRNGRNRCCI 315
            + + AG++    GD     + +R+D ALY+AK +GRN C I
Sbjct: 608 KLTISAGIACT-DGDKSFEHLLKRADDALYRAKSSGRN-CAI 647