Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  104 bits (259), Expect = 3e-27
 Identities = 65/187 (34%), Positives = 99/187 (52%), Gaps = 3/187 (1%)

Query: 128 RVTGEVIGLIGVSTDITDIVELREQLYQLANTDSLTQLCNRRKLWADFRAAFARAKRLRQ 187
           RV GE + ++ V+++I+   EL  +L +L++TD LT L NRR+L  DF   F        
Sbjct: 111 RVDGEEV-VLWVASNISKRHELELRLRELSDTDQLTGLYNRRRLERDFALHFDNFSEQGM 169

Query: 188 PLSCISIDIDNFKLINDQFGHDKGDEVLCFLAKLFQSVISDHHFCGRVGGEEFIIVLENT 247
           P + + +DIDN K IND  GH KGDE +  +A++ +       +  R GG+EF++VL   
Sbjct: 170 PTTILMLDIDNLKQINDAKGHHKGDENILAVAEICRREFRKTDYAYRFGGDEFVVVLPGL 229

Query: 248 HVETAFHLAEQIRQRF--AEHPFFEQNEHIYLCAGVSSLHHGDHDIADIYRRSDQALYKA 305
               A  + E + Q F  A     E      +  G++ +  GD    D  RR+D ALY+A
Sbjct: 230 LPTQAMAMVEALHQSFNRALSTLAEDELLATISLGMTGIKAGDTSYQDTLRRADMALYQA 289

Query: 306 KRNGRNR 312
           K  G+N+
Sbjct: 290 KDQGKNQ 296