Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  116 bits (290), Expect = 8e-31
 Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 9/209 (4%)

Query: 117 IYRAVKHPILHRVTGEVIGLIGVSTDITDIV-------ELREQLYQLANTDSLTQLCNRR 169
           +Y+ V    L  +TG++  +  +  D+TD+           E+L  L+ TD LTQL NRR
Sbjct: 109 MYQNVTLLPLSSLTGQITHISMIIYDVTDVAINKLQLKAANERLEHLSQTDGLTQLHNRR 168

Query: 170 KLWADFRAAFARAKRLRQPLSCISIDIDNFKLINDQFGHDKGDEVLCFLAKLFQSVISDH 229
                 +  F R  R  +P + +  DID+FK IND +GH  GD V+  ++ + +  + D 
Sbjct: 169 HWQLCMQKEFDRHARYGEPTTLVMFDIDHFKRINDTYGHIAGDRVIQHVSHILRQSLRDT 228

Query: 230 HFCGRVGGEEFIIVLENTHVETAFHLAEQIRQRF--AEHPFFEQNEHIYLCAGVSSLHHG 287
              GR GGEEF +VL NT+ E A H A+++R++   +E  F      + +  G+  +   
Sbjct: 229 DCAGRYGGEEFSVVLSNTNAEAALHFADRLREKIEASELRFESAILKVTVSIGICGIDEH 288

Query: 288 DHDIADIYRRSDQALYKAKRNGRNRCCIY 316
             + A    ++D ALY+AK+ GRN C I+
Sbjct: 289 LSNSAQWLGQADSALYQAKQKGRNCCVIF 317