Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1000 a.a., diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  122 bits (307), Expect = 3e-32
 Identities = 70/184 (38%), Positives = 101/184 (54%), Gaps = 2/184 (1%)

Query: 136 LIGVSTDITDIVELREQLYQLANTDSLTQLCNRRKLWADFRAAFARAKRLRQPLSCISID 195
           ++ ++ DITD   L + L + A TD LT + NRR+ + D      RA R  +PL+ + +D
Sbjct: 794 VLSIARDITDRKRLEQALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLMLD 853

Query: 196 IDNFKLINDQFGHDKGDEVLCFLAKLFQSVISDHHFCGRVGGEEFIIVLENTHVETAFHL 255
           +D FK +ND+FGH  GD VL    +  Q  + +    GR+GGEEF  VL  T ++ A   
Sbjct: 854 LDRFKRVNDRFGHHAGDAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLDDALAA 913

Query: 256 AEQIRQRFAEH--PFFEQNEHIYLCAGVSSLHHGDHDIADIYRRSDQALYKAKRNGRNRC 313
           AE++R+   E   PF  Q     +  G++    GD  + DI RR+D ALY AK  GRNR 
Sbjct: 914 AERLRRAVEEMDVPFSGQRLRCTVSIGLALRGPGDGALDDILRRADSALYAAKEAGRNRV 973

Query: 314 CIYR 317
            + R
Sbjct: 974 MLAR 977