Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  109 bits (273), Expect = 2e-28
 Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 6/171 (3%)

Query: 147 VELREQLYQLANTDSLTQLCNRRKLWADFRAAFARAKRLRQPLSCISIDIDNFKLINDQF 206
           V    QL  +A TD LTQL NRR ++A     F  A + + P S I  D D+FK IND F
Sbjct: 452 VHRNRQLQTIALTDYLTQLPNRRHIYAQAEQYFQLALKQQIPFSIIIFDADHFKKINDNF 511

Query: 207 GHDKGDEVLCFLAKLFQSVISDHHFCGRVGGEEFIIVLENTHVETAFHLAEQIRQRFAEH 266
           GH+ GD+ L  +A+  +++ +D +  GR+GGEEF+I+L NT  + A+ LA +++      
Sbjct: 512 GHEIGDQALLTIAEASKTLTTDRNLVGRIGGEEFLILLPNTDADRAWKLAHELQTLITRF 571

Query: 267 PFFEQNEHIYL--CAGVSSL----HHGDHDIADIYRRSDQALYKAKRNGRN 311
                   + L   AGV++L       D + A + +R+D ALY+AK  GRN
Sbjct: 572 GAINLPVELKLTVSAGVATLPIQSELQDQNFARLLKRADNALYEAKNAGRN 622