Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  122 bits (305), Expect = 2e-32
 Identities = 79/196 (40%), Positives = 111/196 (56%), Gaps = 22/196 (11%)

Query: 137 IGVSTDITDIVELREQLYQ-------LANTDSLTQLCNRRKLWADFRAAFARAKRLRQPL 189
           I ++TDITD  ++ E L +       LANTD LT+L NRR   A F    + A++  Q L
Sbjct: 116 IEIATDITDRKQMEEALIEAKSTAERLANTDELTKLYNRR---AFFNLGLSIAQQSGQAL 172

Query: 190 SCISIDIDNFKLINDQFGHDKGDEVLCFLAKLFQSVISDHHFCGRVGGEEFIIVLENTHV 249
           + I  DID FK +ND++GH  GD  L  +AKL Q+++      GR+GGEEF I+L + H 
Sbjct: 173 AFIMFDIDRFKHVNDRWGHTTGDAALIHIAKLTQAILKPVDILGRLGGEEFGILLPDLHH 232

Query: 250 ETAFHLAEQIRQRFAEHPFFEQNEHIYLCA---GVSSLH----HGDHD----IADIYRRS 298
           E A  LAE IR RF E P    N  I  C    G++S+     H + +    +  ++  +
Sbjct: 233 EQACQLAESIRCRFEEQP-LALNGQIIKCTASFGIASITIPVIHSEKEAQNLLETLFNSA 291

Query: 299 DQALYKAKRNGRNRCC 314
           DQA+ +AKRNGRN+ C
Sbjct: 292 DQAMMQAKRNGRNQVC 307