Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., GGDEF domain/HAMP domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  100 bits (248), Expect = 1e-25
 Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 7/172 (4%)

Query: 153 LYQLANTDSLTQLCNRRKLWADFRAAFARAKRLRQPLSCISIDIDNFKLINDQFGHDKGD 212
           L ++A TD LT L NRR +  +         R  +P SC+  DID FK IND +GH+ GD
Sbjct: 352 LERMAVTDQLTGLHNRRYVAVEGAKVVDVCWRGGRPCSCLMADIDRFKTINDTYGHEAGD 411

Query: 213 EVLCFLAKLFQSVISDHHFCGRVGGEEFIIVLENTHVETAFHLAEQIRQRFAEHPFFEQN 272
            VL   A++F+  +       R GGEEF+++  N     A  +AE++R   A     E  
Sbjct: 412 AVLQAFAEVFRGGLRWSDIGARHGGEEFVVIAPNADTRDAVVIAERLRVD-AAALVVEFG 470

Query: 273 EHIY---LCAGVSSL--HHGDHD-IADIYRRSDQALYKAKRNGRNRCCIYRQ 318
            H+    +  GV+SL  H GD + + ++ RR+D ALY+AK  GR+R C++R+
Sbjct: 471 GHVIRFTVSVGVASLDEHGGDGNLLEELLRRADTALYRAKAEGRDRVCVWRE 522