Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 99.4 bits (246), Expect = 8e-26
 Identities = 64/183 (34%), Positives = 97/183 (53%), Gaps = 4/183 (2%)

Query: 134 IGLIGVSTDITDIVELRE-QLYQLANTDSLTQLCNRRKLWADFRAAFARAKRLRQPLSCI 192
           +G I V T +   V   E +L +L+  D LT L NRR          AR +R   P++ +
Sbjct: 56  VGSILVFTGMGGWVGREELRLERLSLVDPLTGLYNRRSFETALEKEMARWRRREAPVALL 115

Query: 193 SIDIDNFKLINDQFGHDKGDEVLCFLAKLFQSVISDHHFCGRVGGEEFIIVLENTHVETA 252
            +D+D+FKL+ND +GH  GD VL  LA+L  S +       RVGGEEF +++     + A
Sbjct: 116 MLDLDHFKLVNDTWGHQAGDRVLQTLARLLSSTVRIEDLPARVGGEEFAVIMPEVTGDEA 175

Query: 253 FHLAEQIRQRFAEHPFFEQNEHIYLCAGVSSLHHGDHDIAD---IYRRSDQALYKAKRNG 309
           +  AE++R   A H F    E I +   +        ++AD   + R +D+ALY+AK+ G
Sbjct: 176 YQAAERLRLVVAGHLFDIGVESIEVRVSIGVACTEMQNVADGATLVRLADEALYRAKQRG 235

Query: 310 RNR 312
           R+R
Sbjct: 236 RDR 238