Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  107 bits (267), Expect = 4e-28
 Identities = 88/293 (30%), Positives = 135/293 (46%), Gaps = 19/293 (6%)

Query: 34  LVLNELGVYVFVKNRRGEYLYANPLTLKLFEADAQSLFGKTDHDFFHDDQLSDILAADQQ 93
           LVL+ L    F+ ++ G Y+         +  D   L G    D  +D++ +  L   QQ
Sbjct: 9   LVLDALPDPAFILSQSGRYVAVFGGKDARYYHDGSGLVGLYLSDVLNDEKTTYYLGIIQQ 68

Query: 94  VFETRLSVIHEERAIAKS-NGLVR------IYRAVKHPILHRVTGEVIGLIGVSTDITDI 146
             ++R  +I E     K   GL        I+   +   L  +      ++ V+++I+  
Sbjct: 69  ALDSRKLLIEEYELSNKDVKGLPDEGPSQPIWFEGRIQALDFLVNNEPVVLWVASNISKR 128

Query: 147 VELREQLYQLANTDSLTQLCNRRKLWADFRAAFARAKRLRQPLSCISIDIDNFKLINDQF 206
            +L  QL QL++TD LT L NRR+L  D +  F    R R P S + +D+D+ K INDQ 
Sbjct: 129 HKLELQLRQLSDTDQLTGLYNRRRLDRDLQLLFDTFSRHRIPASILVLDLDHLKRINDQL 188

Query: 207 GHDKGDEVLCFLAKLFQSVISDHHFCGRVGGEEFIIVLENTHVETAFHLAEQI------- 259
           GH  GD V+  +A   Q          R GG+EF+I L     + A   AE +       
Sbjct: 189 GHQAGDRVIMAVADTCQQQFRKTDSAYRFGGDEFVIALPGVDHDQAIVFAEYLCDCCFKA 248

Query: 260 RQRFAEHPFFEQNEHIYLCAGVSSLHHGDHDIADIYRRSDQALYKAKRNGRNR 312
            Q+ +    F       +  GV+S+  GD    D  +R+D ALY+AKR+G+NR
Sbjct: 249 LQQLSVKGLFAT-----VSIGVASIEAGDKSYEDTLKRADAALYQAKRDGKNR 296