Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 878 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  111 bits (277), Expect = 7e-29
 Identities = 70/192 (36%), Positives = 100/192 (52%), Gaps = 3/192 (1%)

Query: 131 GEVIGLIGVSTDITDIVELREQLYQLANTDSLTQLCNRRKLWADFRAAFARAKRLRQPLS 190
           G+V   + V +DI+   +   QL  LA  D LT L NR KL    +     AKRL   L+
Sbjct: 426 GDVRYFVAVFSDISAQKQSEAQLAHLAYFDPLTHLPNRMKLMMQLKQELRHAKRLNAQLA 485

Query: 191 CISIDIDNFKLINDQFGHDKGDEVLCFLAKLFQSVISDHHFCGRVGGEEFIIVLENTHV- 249
            + ID+D FK IND FGH  GDE+L  LAK  +S + +     R+GG+EF+ ++      
Sbjct: 486 TVFIDVDLFKHINDSFGHSIGDEMLVELAKRLRSQLQEQDVLSRIGGDEFVALISGIQSH 545

Query: 250 ETAFHLAEQIRQRFAEHPFFEQNEHIYLCAGVS-SLHHGDHDIAD-IYRRSDQALYKAKR 307
           E A     Q+RQ F +       +H+ L A +  S++  D   AD + R +D A+Y+AK 
Sbjct: 546 EDAAAAINQLRQVFEQPFVVSTGDHLRLTASMGVSIYPDDGSNADTLLRNADAAMYRAKS 605

Query: 308 NGRNRCCIYRQS 319
            GRN    Y +S
Sbjct: 606 EGRNNFAFYTES 617



 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 1/117 (0%)

Query: 42  YVFVKNRRGEYLYANPLTLKLFEADAQSLFGKTDHDFFHDDQLSDILAADQQVFETRLSV 101
           +++VKN +G Y   N    K +E     + GKTD D F  +     L  D+   E    +
Sbjct: 216 HIWVKNSQGVYTICNHSVEKAWELPRSEIVGKTDEDLFGKEIAEIFLNGDRLAIEAGTPI 275

Query: 102 IHEERAIAKSNGLVRIYRAVKHPILHRVTGEVIGLIGVSTDITDIVELREQLYQLAN 158
           I  E    +          +K P +    G + G+IG++ +I+   E+ EQL    N
Sbjct: 276 IVAECLDGEKQNKHLWLETLKIPAM-TSEGALAGVIGMTRNISKHKEVEEQLTLATN 331