Pairwise Alignments

Query, 299 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 51.2 bits (121), Expect = 3e-11
 Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 18/270 (6%)

Query: 25  STIEPSAMSFYRWLLAMAILTPFCLPSA-IRQ--WSTVKRHLSKLAFLALLGMVLNQSLG 81
           + +E S ++FYR L+  A L  + L +   RQ      KRHL   A LA   +   QS+G
Sbjct: 43  ANLEASIITFYRLLIGAACLIAYMLATGKARQILHRPGKRHLFNGAMLAGFMVFYVQSIG 102

Query: 82  YYAGLTTTATNMSLITSFVPLMSVFMSLPLLNKPISALSVVGGVLSLSGLAYMLGEGNPL 141
           Y         N  ++    PL+S   +  L ++ ++   ++   ++L G+  +L     L
Sbjct: 103 YI-----NMANAVMLIYLAPLVSAIGAHFLFHERLTRQDLLAIGIALIGVVAILPS---L 154

Query: 142 FFLHQSVTE--GDALMVMAALVYALYCVLLKRWKMPFSNWTLIYLQGVCAVFMLIPLWLT 199
             L  S  E  G    ++A L Y+ + +L+ R     S +    +Q       L+P  L 
Sbjct: 155 ESLTGSTAELKGYGFALLALLSYSGF-MLINRRPASASPYQSTLIQLSFGALCLLPFAL- 212

Query: 200 SDTLLPTEGSLSLIAYAGIAASLLAPWMWVKAIDAIGADSTAMFMNLLPVFSVSLAATLL 259
              ++P+      +A  G+    LA    VKA+  + A +      + PV  V L  +L 
Sbjct: 213 HQAVMPSLTQWFWLALIGVFPGFLAILFAVKALRVLPAATFGTLAYIEPVTVVILGWSLF 272

Query: 260 GEKVHPYHLIG-GLLVISGVALSQLKIQRR 288
            E + P  L+G GL++ +G  L Q + +RR
Sbjct: 273 AEHLTPMQLMGCGLIICAG--LIQTRKRRR 300