Pairwise Alignments

Query, 299 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 63/271 (23%), Positives = 127/271 (46%), Gaps = 16/271 (5%)

Query: 10  VLIWGGNSIVNKLAASTIEPSAMSFYRWLLAMAILTPFCLPSAIRQWSTVKRHLSKLAFL 69
           VL++GG ++ +KL    +    ++F R ++A  +L        I+         SK  +L
Sbjct: 17  VLMFGGTALFSKLIP--LSALDITFLRCVVAALVLALL-----IKFRGKYISLASKQDYL 69

Query: 70  ALLGMVLNQSLG---YYAGLTTTATNMSLITSFV-PLMSVFMSLPLLNKPISALSVVGGV 125
             +G+ +  SL    Y+A +  ++  + +I  F  P+M+V     L    I  + ++ GV
Sbjct: 70  VAIGLGVIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVIAEPLLTGNKIKLMDIISGV 129

Query: 126 LSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSNWTLIYLQ 185
           L L G+  ++ E N    L    T G A+ +++A+++    +L KR+   +S    ++ Q
Sbjct: 130 LVLIGVVLLIPEAN----LGNDTTLGIAVGIVSAMLFTARNLLQKRYFSQYSGPHAMFYQ 185

Query: 186 GVCAVFMLIPLWLTSDTLLPTEGSLSLIAYAGIAASLLAPWMWVKAIDAIGADSTAMFMN 245
            + A   L+P W  ++    +  +  LI   G+  +     ++  A+  + A +  +   
Sbjct: 186 TLVAAVFLMP-WHQTELQTISLETWGLIILLGVVFTAAPHALFTSALRQLSAKTVGLVSC 244

Query: 246 LLPVFSVSLAATLLGEKVHPYHLIGGLLVIS 276
           L P +   LA  +LGE ++   LIGG ++++
Sbjct: 245 LQPFYGAMLALVILGEALNLNTLIGGTIIVA 275



 Score = 28.9 bits (63), Expect = 1e-04
 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 5/110 (4%)

Query: 174 MPFSNWTLIYLQGVCAVFMLIPLWLTSDTLLPTEGSLSLIAYAGIAASLLAPWMWVKAID 233
           +P S   + +L+ V A  +L  L       +        +   G+   ++    WV    
Sbjct: 30  IPLSALDITFLRCVVAALVLALLIKFRGKYISLASKQDYLVAIGLG--VIVSLHWVTYFA 87

Query: 234 AIGADSTAMFMNLL---PVFSVSLAATLLGEKVHPYHLIGGLLVISGVAL 280
           A+   S A+ M      PV +V     L G K+    +I G+LV+ GV L
Sbjct: 88  AMQLSSVAIGMIAFFTYPVMTVIAEPLLTGNKIKLMDIISGVLVLIGVVL 137