Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  140 bits (353), Expect = 3e-38
 Identities = 82/238 (34%), Positives = 118/238 (49%), Gaps = 1/238 (0%)

Query: 18  PSDVFMNFEAFLSNTETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRH 77
           P  ++   E+  + + T+ H H W Q      G+L +      F APP   IW+PA + H
Sbjct: 20  PRPLYARVESLSAGSWTQAHRHDWVQFSYAISGVLGVHTAAGSFFAPPQRGIWIPADLEH 79

Query: 78  RSYNRKPIEYCSLNIASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQS-CEDKRL 136
           +       E  SL +          +  +++VT +   +I  F +  ++  Q   +++RL
Sbjct: 80  QVVTSTRAEMRSLYVHRHACPWADERCRVLEVTPLARELIKVFCQLPVDYPQGDTQEQRL 139

Query: 137 VQVLLDQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARH 196
           VQVLLDQLAT       LP   H  L  +   + E P  N TL  WAE++ T+E+TL R 
Sbjct: 140 VQVLLDQLATLPEVGFSLPLPRHARLLGLCNELIEQPEQNVTLHAWAERLGTSEKTLMRL 199

Query: 197 CQAELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTP 254
            Q E G+SF  WR R+R L S+  L QG +V   AL+ GY+  S FI  FK   G TP
Sbjct: 200 FQRETGLSFRAWRQRMRLLSSLGSLEQGDSVTSAALSCGYDSTSAFIAAFKGMFGFTP 257