Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score =  146 bits (369), Expect = 4e-40
 Identities = 81/237 (34%), Positives = 120/237 (50%)

Query: 18  PSDVFMNFEAFLSNTETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRH 77
           P  +F   E+    T T  H+HPW Q+     G+L +  E  RFLAPP  AI +P G+ H
Sbjct: 21  PRPLFARSESLAERTTTPRHNHPWAQLSYAISGVLRVHTERGRFLAPPQRAILIPPGLLH 80

Query: 78  RSYNRKPIEYCSLNIASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSCEDKRLV 137
              +    E  SL I  ++    PA   ++ V+ ++  +I  F    ++  +   D RL 
Sbjct: 81  EVISSPQTEMRSLYIDQRVVPWAPAHCQVLAVSPLLRELIRTFGTLPVDYDEQGADGRLA 140

Query: 138 QVLLDQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHC 197
            V+LDQL       + LP  +   L  I   + E P  + +L QW+E++H +E+TL R  
Sbjct: 141 AVILDQLRAAPELSYSLPWPDDARLRGICEALYEQPDLSLSLAQWSERLHISEKTLTRQF 200

Query: 198 QAELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTP 254
           Q + G+SF  WR R+R L ++ LL +G  V +VAL  GY   S FI  F +  G TP
Sbjct: 201 QRDTGLSFRAWRQRLRLLSALPLLERGQPVTDVALACGYESTSAFIAAFGQQFGTTP 257