Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  109 bits (272), Expect = 8e-29
 Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 4/229 (1%)

Query: 33  ETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKPIEYCSLNI 92
           ET  H+H  GQ+  +  G+L +  E      PP  A W+P G +H      P+    + +
Sbjct: 84  ETAWHAHVRGQLMYVEQGVLTVHTEHGTSSLPPGCAGWMPPGQQHTVELAGPLRGWGVVV 143

Query: 93  ASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNIN--VAQSCED--KRLVQVLLDQLATRE 148
                +  PA++ +I+++ +   +I       ++  +A+  +   +RL  VLLD+L    
Sbjct: 144 RPDACSGLPARSGVIRLSGLAREVIMRAASWPLSAMLAEPVDPARQRLAAVLLDELCQAP 203

Query: 149 TQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAELGMSFTEW 208
            +H  LP    + L  I   + + P D   L+ WA     + R+L+RH + E G+SF +W
Sbjct: 204 IEHLHLPMPADRRLLRIARQLLDTPADPRPLEAWATWGGLSPRSLSRHFRDETGLSFAQW 263

Query: 209 RLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQY 257
           R + R    +  L QG AV +VA  LGY+  S F+++F ++ G  P +Y
Sbjct: 264 RQQARLAEGLRRLSQGTAVAQVADQLGYSSPSAFVSVFHRHFGAPPARY 312