Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., AraC-type DNA-binding domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 36/238 (15%)

Query: 37  HSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKPIEYCSLNIASQL 96
           H H  GQ+     G +    ED   + PP  A+W+P    HR+     + Y SL      
Sbjct: 34  HRHGKGQLLYAPQGCITFAWEDAIGILPPTKAVWIPPHTPHRAVMTNVVAYRSLYFDCSR 93

Query: 97  TTAFPAKTSLIKVTSIVSAIID-------DFRERNIN----------VAQSCEDKRLVQV 139
             A PA  +++ V  ++ A+ID       D  E ++            A  C   RL  +
Sbjct: 94  IVA-PASVTMVDVNPLLKALIDKMAFWPWDTPEASMTHSCALFWEEFYAARCHSFRLT-I 151

Query: 140 LLDQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQA 199
            +D+      Q  F P    ++L P              +   A  +  + +T+ R  + 
Sbjct: 152 PVDRRFHGFRQQLFRP----EFLPP-------------DIDSLAATIGASTKTVTRLFKR 194

Query: 200 ELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQY 257
           + GMS+ EWR + R L ++ELL     V EV   LG++  S FI  F+K +G TP  +
Sbjct: 195 DTGMSYQEWRQQWRLLKAIELLSGALPVSEVGFRLGFSSDSAFIAFFRKQTGKTPRHF 252