Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score = 89.4 bits (220), Expect = 7e-23
 Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 2/226 (0%)

Query: 37  HSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKPIEYCSLNIASQL 96
           H H  GQ+   + G++ +  E   ++ P   A+W+P    H   +  P +  S+ IA   
Sbjct: 35  HHHARGQLFGSTRGLVSVSVEAGVWVVPAIHAVWLPPNHVHWGRSHGPFDGWSVYIAPAA 94

Query: 97  TTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSCEDKR--LVQVLLDQLATRETQHHFL 154
               P+    I+ + ++   +       +      ++++  +  VLLD++     +   L
Sbjct: 95  CQDLPSSPCTIRTSGLLREAVLRAATWPLEPFVPLDEQKAHVAAVLLDEIRNLPVEPFGL 154

Query: 155 PSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAELGMSFTEWRLRVRY 214
           P      L  I   +  +P D    + WA     + R+L R    E G +FT WR R R 
Sbjct: 155 PLPRDPRLERIARALIADPADERDFEAWARWAAISPRSLGRRFVTETGFTFTAWRQRARL 214

Query: 215 LYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQYKSR 260
           + S+E+L     V  +AL LGY  AS FI++F++  G TP  Y+ R
Sbjct: 215 MRSLEMLATDLPVTTIALDLGYATASAFISLFRRTFGETPAVYRRR 260