Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  140 bits (352), Expect = 3e-38
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 2/223 (0%)

Query: 37  HSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRH--RSYNRKPIEYCSLNIAS 94
           HSHPW Q+    GG+  +E  +  ++ PP  A+WVPAGI H  R+          + I +
Sbjct: 23  HSHPWCQLVYAIGGVTIVETPEGSWVVPPDRAVWVPAGITHCVRAARGGQNRSVYVTIEA 82

Query: 95  QLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSCEDKRLVQVLLDQLATRETQHHFL 154
                 P    ++ V+ +   +I +F  R  +  +   D RLV+VLLDQ+A    Q   L
Sbjct: 83  AQAAGLPKGCKVVAVSPLTRELILEFGRRPDDYDEDGADGRLVRVLLDQIAALPAQPLHL 142

Query: 155 PSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAELGMSFTEWRLRVRY 214
           P         +   +E +P D   L++WA +   + RTLAR  +A+ G++F +WRLR+R 
Sbjct: 143 PWPRDPRALAVARALEADPADGRPLEEWAREAGASARTLARTFRADCGLTFGQWRLRLRL 202

Query: 215 LYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQY 257
           L ++E L  G AV  VA  +GY+Q S FI MF++  G TP  Y
Sbjct: 203 LGALERLAAGEAVTAVAFDMGYDQPSAFIAMFRRLLGTTPGAY 245