Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  114 bits (285), Expect = 2e-30
 Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 6/236 (2%)

Query: 22  FMNFEAFLSNTETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYN 81
           F ++EA     E   H H  GQ+ +   G +   A +  ++ PP  A+W+P G+ H +  
Sbjct: 35  FSDYEA-----EVPHHRHRQGQLIMALHGAVTCTAANGLWIVPPGSAVWIPGGVSHSNQV 89

Query: 82  RKPIEYCSLNIASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSCEDKRLVQVLL 141
                   L +  +     P     + V+ ++  +I    + + +        RLV+V+L
Sbjct: 90  TANARLSYLFVEPE-AALLPQDCCTLSVSPMLREMILRLADASGHDEPKDHRGRLVRVML 148

Query: 142 DQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAEL 201
           D+LA   T    LP ++H  +A I + +   P D  TL +WA  V  +ER+L R    E 
Sbjct: 149 DELALMPTGGLKLPVSHHPKIAMIASALAAQPGDRRTLMEWASHVAMSERSLKRLMIQET 208

Query: 202 GMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQY 257
           G+SF  WR ++  + ++  L  G +V+ V+L+LGY  A+ FI MFKK  G TP +Y
Sbjct: 209 GLSFGRWRRQLHLIVALRELASGASVQSVSLSLGYESATAFIVMFKKALGTTPARY 264