Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  101 bits (251), Expect = 2e-26
 Identities = 63/237 (26%), Positives = 115/237 (48%), Gaps = 13/237 (5%)

Query: 27  AFLSNTETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKPIE 86
           A L   ++  HSH   Q+     G + +  +    + PP  A W+P   RH     + ++
Sbjct: 24  ARLGQHDSGMHSHAKAQLLYAPQGCMTITLDGLHCVLPPTRAAWIPPACRHSVVMNRVVD 83

Query: 87  YCSLNIASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSCEDKRLV------QVL 140
           Y SL  A QLT +   +  +++VT ++ A+++        +A    DK  +      Q+ 
Sbjct: 84  YRSLYFAPQLTGSIANRIQILEVTPLLQALVE-------RMAFWPWDKSAMAMVNTYQLF 136

Query: 141 LDQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAE 200
            ++L+  +  H  LP  + + L   LA ++  P D   L+Q  +++  + +T++R    +
Sbjct: 137 FEELSQAKESHLVLPMPSDRRLQTWLAELQRAPWDVPPLKQLGQQLGASSKTISRIFTRQ 196

Query: 201 LGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQY 257
            GM +  WR + R   ++ LL  G+ V +VA  L ++  S FI  FK+++G TP QY
Sbjct: 197 TGMPYQNWRQQWRLQQAIALLASGYQVNDVAYRLAFSSDSAFIAFFKQHTGSTPLQY 253