Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  103 bits (256), Expect = 5e-27
 Identities = 62/230 (26%), Positives = 114/230 (49%), Gaps = 7/230 (3%)

Query: 37  HSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKPIEYCSLNIASQL 96
           H H   Q+     G++E+  E++ ++  P  A+W+PA + HR   R  +   S+      
Sbjct: 36  HWHHAAQLIYAESGVMELSCEESFWIISPQQALWMPAELPHRLKARGQVSLRSVYFQPD- 94

Query: 97  TTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSCE----DKRLVQVLLDQLATRETQHH 152
             A P + S    + +VS ++ +  +  + V  S +    +  L+Q+L+ ++   +    
Sbjct: 95  --ALPERFSKQPQSLVVSPLLRELMKSAMPVTSSSQPSSREVHLMQLLMSEIGWAQEIPL 152

Query: 153 FLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAELGMSFTEWRLRV 212
            LP      L  I   +  +P ++ TL QW E V  + RTL+R  Q +LG SF  WR + 
Sbjct: 153 KLPMPKDNRLQKICLGLLADPGNDCTLSQWGEIVGASPRTLSRLFQTQLGTSFAIWRQQA 212

Query: 213 RYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQYKSRLL 262
           R   ++  L  G  +  VA+ +GY+ A  F + FKK  G+TP +++++++
Sbjct: 213 RIFAAIPRLNLGEPIVRVAMEMGYDSAGAFASAFKKMMGVTPSEFRTQVV 262