Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 17/232 (7%)

Query: 37  HSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKPIEYCSLNIASQL 96
           HSHP GQ+   + GIL +++++  ++ P   A+W+P+G RH+          +L I    
Sbjct: 42  HSHPRGQLLWAAKGILRVQSDNAVWVVPSTHAVWLPSGCRHQINCETQAHLRNLYID--- 98

Query: 97  TTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSCEDK--------RLVQVLLDQLATRE 148
               P+    ++ T +V   +         V + C+D         RL    +D+L   +
Sbjct: 99  ----PSYRVRVQDTQVVMVTMTPLMREM--VLKLCQDATMEPAKYFRLGLSAIDELDALD 152

Query: 149 TQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAELGMSFTEW 208
           + + +L + +   L  ++  + + P    TL + A+    + RT+ R  +AE G ++ +W
Sbjct: 153 SVNTYLNAGSDPRLGRVIQLLIKKPQAEYTLAELAQSAGASIRTIERLFKAETGQTYRQW 212

Query: 209 RLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQYKSR 260
           R R R L S+E L QG +   VA +LGY   S F   FK   G TP++Y  +
Sbjct: 213 RQRYRLLNSLERLTQGESTTSVAHSLGYLSVSSFSAAFKALFGCTPQEYAQK 264