Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  107 bits (268), Expect = 2e-28
 Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 1/238 (0%)

Query: 20  DVFMNFEAFLSNTETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRS 79
           ++ +   A +   ++  H H   Q+   S G +     DT+ + PP  A W+PAG+ H+ 
Sbjct: 17  NLVIGIAAEMGEHDSGVHQHSKAQLLYSSAGCMRFNLADTQVVLPPTRAAWLPAGVIHQV 76

Query: 80  YNRKPIEYCSLNIASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSCEDKRLVQV 139
             R  + Y SL    +   + P   ++  V  ++ A+ID       +  +  +      +
Sbjct: 77  TMRNVVAYRSLYFEPETVASLPDNVTIFHVDPLLKALIDTMSFWPWDKPRHSQHNAFA-L 135

Query: 140 LLDQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQA 199
           L+++L   + ++  LP    K L   L  +++      +LQ+ A ++  +ERT++R    
Sbjct: 136 LIEELVNADAENLSLPLPKDKRLQSWLKQLQQQQKIPASLQEMAIEIGASERTISRIFSN 195

Query: 200 ELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQY 257
           E GM++  WR + R L ++E L  G +V +V   L ++  S FI+ FK+Y+G TP QY
Sbjct: 196 ETGMAYQAWRQQWRLLSAIEQLAAGASVAQVGFNLQFSSDSAFISFFKQYTGTTPAQY 253