Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  294 bits (753), Expect = 1e-84
 Identities = 143/253 (56%), Positives = 185/253 (73%)

Query: 9   HPSLSIEHPPSDVFMNFEAFLSNTETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLA 68
           HP  + + P +D+F N+EAFL NT T +HSH WGQ+QLISGGI+E+ A   RFL+P   A
Sbjct: 6   HPLKAEQAPVADIFFNYEAFLPNTITPKHSHTWGQLQLISGGIMELHAAGQRFLSPSQYA 65

Query: 69  IWVPAGIRHRSYNRKPIEYCSLNIASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVA 128
           IWVPAGI H S+ R+ I YCS+NI +    AFP +T L+ VT I  AI++D RER I VA
Sbjct: 66  IWVPAGIEHESFTRRSIHYCSMNIVASRAGAFPNETCLLAVTPIALAIVNDLRERQIRVA 125

Query: 129 QSCEDKRLVQVLLDQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHT 188
           +S  DKRLV+VL+DQL   + Q  FLPS++ K L PIL  +E +P    +L+ WA ++HT
Sbjct: 126 ESDADKRLVEVLIDQLILGQAQPQFLPSSSDKLLQPILQQLELDPASQKSLKSWASELHT 185

Query: 189 TERTLARHCQAELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKK 248
           TERTLAR CQ  LGMSFTE R R +++YS++LLR+G A+KEVALTLGYNQ SP+I MFKK
Sbjct: 186 TERTLARRCQDSLGMSFTELRQRHKFIYSLQLLREGLAIKEVALTLGYNQTSPYIVMFKK 245

Query: 249 YSGLTPEQYKSRL 261
           Y+  +PEQY+ +L
Sbjct: 246 YAQYSPEQYRRQL 258