Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  105 bits (262), Expect = 1e-27
 Identities = 66/229 (28%), Positives = 115/229 (50%), Gaps = 7/229 (3%)

Query: 37  HSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKPIEYCSLNIASQL 96
           H H W Q+ L   G+L+ EA    FL P   A++VPAG+ H S       +  + +    
Sbjct: 58  HKHCWHQLILPLQGLLQTEANGALFLVPHTTALFVPAGVIHESVAITDTCFIGVYLNPMC 117

Query: 97  TTAFPAKTSLIKVTSIVSAIIDDFRERNI-NVAQSCED------KRLVQVLLDQLATRET 149
              + A    + +++ +  ++   R++ + N + + E       +RL++VL DQ+ + E 
Sbjct: 118 GRDYGATIKPVAMSAFLRELVLTIRKQCVFNTSMNVEPIALPTIQRLLEVLYDQINSAEG 177

Query: 150 QHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAELGMSFTEWR 209
           Q   L     + L  I   + + P  + +L +W E V  +ERTL+R    E G SF  WR
Sbjct: 178 QTFKLLIPQDRRLKLIFEHLTQTPALDLSLAKWGEMVGASERTLSRLFVREFGSSFGLWR 237

Query: 210 LRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQYK 258
             +R +YS+ LL    +++ VA  +GY   S +I  FK+  G+TP++++
Sbjct: 238 QHLRLIYSLSLLATNLSIQNVAHQIGYQNDSSYIKAFKERFGMTPQRFR 286