Pairwise Alignments

Query, 460 a.a., metal-dependent phosphohydrolase from Vibrio cholerae E7946 ATCC 55056

Subject, 964 a.a., HAMP domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 69.3 bits (168), Expect = 5e-16
 Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 9/117 (7%)

Query: 312 RAALLHDIGKLGVSNAILDKPGKLDEAEWRAVQAHAAYTEQILYKLSPF----KTLARMA 367
           R  +L+D G+L   + +    G L   E   +  H   T  +L +L PF    + +  +A
Sbjct: 803 RPEVLYDRGEL---HNLSIPWGTLTSEERYKINEHIIQTIMMLSEL-PFPAHLENVPEIA 858

Query: 368 GAHHEKLDGTGYPRGVNGDEISLMTRIITTADIFDALSA-ERPYRAAMPIDKALAIM 423
           G HHE++DGTGYPR + G+ +  + RI+  ADIF+AL+A +RPY+ A  + +A+ IM
Sbjct: 859 GGHHERMDGTGYPRRIKGELLHPLARIMAVADIFEALTAPDRPYKKAKTLSQAMNIM 915



 Score = 43.9 bits (102), Expect = 2e-08
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 17/126 (13%)

Query: 224 VVEQLVENPRFLSGLKATD--ISQRVMNLPPAQAHLPLDDAYLECIVTAFGKIVDAKSPY 281
           V++Q+  +   L+ L+AT   +   + N    +    L  A++  +  A    +DAKSPY
Sbjct: 542 VIDQVPFSQERLAFLRATSGVVEVALDNDRMVKTQKELFSAFIRLLAQA----IDAKSPY 597

Query: 282 TAGHSERVAVYTDLIA------RQLAISD---ADRIW--LRRAALLHDIGKLGVSNAILD 330
           T GH  RV + + L+A      RQ A +     +  W  L  A+ LHD GK+     ++D
Sbjct: 598 TGGHCTRVPILSRLLAEAASDTRQGAYASFGMTNESWEELYLASWLHDCGKVTTPEFVVD 657

Query: 331 KPGKLD 336
           K  KL+
Sbjct: 658 KATKLE 663



 Score = 26.6 bits (57), Expect = 0.004
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 155 VAQGIHSLDEHWNGQGRPEQRKGEAIPLFSRIALLAQVFD 194
           +A G H   E  +G G P + KGE +   +RI  +A +F+
Sbjct: 857 IAGGHH---ERMDGTGYPRRIKGELLHPLARIMAVADIFE 893