Pairwise Alignments

Query, 311 a.a., DUF808 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., Membrane protein, putative from Pseudomonas fluorescens FW300-N2E2

 Score =  342 bits (876), Expect = 9e-99
 Identities = 188/317 (59%), Positives = 235/317 (74%), Gaps = 19/317 (5%)

Query: 1   MAGASLLTLLDDIATVLDDVALMSKMAAKKTAGVLGDDLALNAQQVSGVAAEREIPVVWA 60
           MAG+SLL L+DDIATVLDDVALM+KMAAKKTAGVLGDDLALNAQQVSGV AERE+PVVWA
Sbjct: 1   MAGSSLLVLIDDIATVLDDVALMTKMAAKKTAGVLGDDLALNAQQVSGVRAERELPVVWA 60

Query: 61  VAKGSFRNKLILVPAALIISSIAPWLIMPLLLIGGLFLCFEGAEKILEKWLHPEPKQNAE 120
           VAKGSF NKLILVP+AL IS+  PWL+ PLL++GG +LCFEG EK+  K+LH   ++ AE
Sbjct: 61  VAKGSFINKLILVPSALAISAFVPWLVTPLLMVGGAYLCFEGFEKLAHKFLHSPAEEQAE 120

Query: 121 --QRAAAIVNEGLETESLATESLAEYEKRKIGGAIRTDFILSAEIIVIALGTVQGHSMLT 178
             Q   A+ +  ++        L  +EK KI GA+RTDFILSAEII I LGTV   ++  
Sbjct: 121 HAQLVEAVADPAVD--------LVAFEKDKIKGAVRTDFILSAEIIAITLGTVADAALTQ 172

Query: 179 QILVVSLIAVIMTIGVYGLVAGIVKLDDLGFYLQRQSKGQGLKASLGGVLVRFAPKLMKG 238
           Q++V+S IA++MTIGVYGLVAGIVKLDDLG +L  Q  GQ  K S+GG ++  AP +MK 
Sbjct: 173 QVIVLSGIAIVMTIGVYGLVAGIVKLDDLGLWL-TQKPGQAAK-SIGGAILSAAPYMMKS 230

Query: 239 LTVVGTAAMFLVGGGIVVHNVPAVHHILEPMLDVVHAWPVVGTLMPTLMNGVIGVVAGSL 298
           L+V+GTAAMFLVGGGI+ H VP VHH +E    V  +    G ++P L+N V G+VAG+ 
Sbjct: 231 LSVIGTAAMFLVGGGILTHGVPVVHHWIE---GVTASAGGAGFIVPMLLNAVAGIVAGAA 287

Query: 299 LVA----VMEVWHKVRG 311
           ++A    V +VW  ++G
Sbjct: 288 VLAGVMVVGKVWKALKG 304