Pairwise Alignments

Query, 311 a.a., DUF808 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., Membrane protein, putative from Xanthomonas campestris pv. campestris strain 8004

 Score =  321 bits (823), Expect = 1e-92
 Identities = 182/322 (56%), Positives = 234/322 (72%), Gaps = 25/322 (7%)

Query: 1   MAGASLLTLLDDIATVLDDVALMSKMAAKKTAGVLGDDLALNAQQVSGVAAEREIPVVWA 60
           MAGASL TLLDDIAT+LDDV++++K+AAKKTAGVLGDDLALNAQQV+GV A+RE+PVVWA
Sbjct: 30  MAGASLFTLLDDIATLLDDVSILTKVAAKKTAGVLGDDLALNAQQVTGVTADRELPVVWA 89

Query: 61  VAKGSFRNKLILVPAALIISSIAPW---------LIMPLLLIGGLFLCFEGAEKILEKWL 111
           VAKGS  NK+ILVPAAL IS++  W         L+MPL++IGG +LCFEG EK+  K+L
Sbjct: 90  VAKGSLVNKVILVPAALAISALEAWLRGRGYNVPLVMPLMMIGGAYLCFEGVEKLAHKFL 149

Query: 112 HPEPK--QNAEQRAAAIVNEGLETESLATESLAEYEKRKIGGAIRTDFILSAEIIVIALG 169
           H E +  Q   +R   + +E ++  +L        EK K+ GAIRTDFILSAEIIV++LG
Sbjct: 150 HSEEEDAQRHAERTRVLADEAVDVVAL--------EKDKVKGAIRTDFILSAEIIVLSLG 201

Query: 170 TVQGHSMLTQILVVSLIAVIMTIGVYGLVAGIVKLDDLGFYLQRQSKGQGLKASLGGVLV 229
            V G S   Q+ V+  IA+ MTIGVYGLVAGIVKLDDLG YL +  KG  L A   G+LV
Sbjct: 202 VVAGVSFGQQVAVLVAIALAMTIGVYGLVAGIVKLDDLGLYLSK--KGAALAALGRGILV 259

Query: 230 RFAPKLMKGLTVVGTAAMFLVGGGIVVHNVPAVHHILEPMLDVVHAWPVVGTLMPTLMNG 289
             AP LMK L+V GT AMFLVGGGI+VHN+P +HH+   ++D+  A   +G L+  L N 
Sbjct: 260 A-APWLMKFLSVAGTLAMFLVGGGILVHNIPTLHHL---VVDLAKASGSLGWLVEALGNM 315

Query: 290 VIGVVAGSLLVAVMEVWHKVRG 311
           ++GVVAG++++A +  + K+RG
Sbjct: 316 LVGVVAGAVVLAAVTGFQKLRG 337