Pairwise Alignments

Query, 311 a.a., DUF808 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  328 bits (841), Expect = 1e-94
 Identities = 180/318 (56%), Positives = 225/318 (70%), Gaps = 20/318 (6%)

Query: 1   MAGASLLTLLDDIATVLDDVALMSKMAAKKTAGVLGDDLALNAQQVSGVAAEREIPVVWA 60
           MAGASLLTLLDDIA +LDDVALMSK+AA+KTAGVLGDDLALNAQQVSGV A+RE+PVVWA
Sbjct: 1   MAGASLLTLLDDIAAILDDVALMSKVAARKTAGVLGDDLALNAQQVSGVNADRELPVVWA 60

Query: 61  VAKGSFRNKLILVPAALIISSIAPWLIMPLLLIGGLFLCFEGAEKILEKWLHP-EPKQNA 119
           VAKGS RNK ILVPAAL+IS+  PW + PLL+ GGLFLC+EG EK+     H  EP  + 
Sbjct: 61  VAKGSLRNKCILVPAALLISAFIPWAVTPLLMFGGLFLCYEGFEKVYHSLTHKHEPAMSQ 120

Query: 120 EQRAAAIVNEGLETESLATESLAEYEKRKIGGAIRTDFILSAEIIVIALGTVQGHSMLTQ 179
            + A             A E L  +EK+K+ GAIRTDF+LSAEII I LG V   S +TQ
Sbjct: 121 SEMAK------------AAEDLKAFEKQKVAGAIRTDFVLSAEIIAITLGVVAESSFMTQ 168

Query: 180 ILVVSLIAVIMTIGVYGLVAGIVKLDDLGFYL-QRQSKG--QGLKASLGGVLVRFAPKLM 236
           ++ +++IAV+MT+GVYGLVAGIVKLDD G YL QRQ  G  + L   LGG LV  AP LM
Sbjct: 169 VVTLAIIAVLMTVGVYGLVAGIVKLDDAGLYLSQRQGDGLLRRLGRKLGGGLVNAAPYLM 228

Query: 237 KGLTVVGTAAMFLVGGGIVVHNVPAVHHILEPMLDVVHAWPVVGTLM----PTLMNGVIG 292
           +GLTVVGT AMF+VGGGI+ H +  +  + E     V    +VG ++    P+L+N + G
Sbjct: 229 RGLTVVGTIAMFMVGGGILTHGIHQIAEVFEQAAHWVAGLTIVGPVLAWMTPSLLNALFG 288

Query: 293 VVAGSLLVAVMEVWHKVR 310
           V+ G++ + VM +  ++R
Sbjct: 289 VLVGAVALVVMSLIGRLR 306