Pairwise Alignments

Query, 311 a.a., DUF808 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Probable conserved integral membrane protein from Mycobacterium tuberculosis H37Rv

 Score =  173 bits (438), Expect = 5e-48
 Identities = 117/317 (36%), Positives = 177/317 (55%), Gaps = 43/317 (13%)

Query: 6   LLTLLDDIATV-------LDDVALMSKMAAKKTAGVLGDDLALNAQQVSGVAAEREIPVV 58
           L  LLD +A +       +DD+   +  A  K AGV+ DD A+  Q V  + AERE+P++
Sbjct: 5   LFGLLDHVAVLARLAAASIDDIGAAAGRATAKAAGVVIDDTAVTPQYVHRITAERELPII 64

Query: 59  WAVAKGSFRNKLILV-PAALIISSIAPWLIMPLLLIGGLFLCFEGAEKILEKWLHPEPKQ 117
             +A GS RNKL+L+ P AL++S + PWL+ PLL++G  +LC+EGAEK+           
Sbjct: 65  KRIAIGSVRNKLLLILPGALLLSQLVPWLLTPLLMLGATYLCYEGAEKV----------- 113

Query: 118 NAEQRAAAIVNEGLETESLATESLAEYEKRKIGGAIRTDFILSAEIIVIALGTVQGHSML 177
                   I   G +    A   +AE E   + GAIRTDFILSAEI+VIAL  V     +
Sbjct: 114 -----CGVIGGRGHD----AAPQVAEREL--VAGAIRTDFILSAEIMVIALNEVADQPFV 162

Query: 178 TQILVVSLIAVIMTIGVYGLVAGIVKLDDLGFYLQRQSKGQGLKASLGGVLVRFAPKLMK 237
            +++V+ ++A+++T  VYG+VA IV++DD+G  L + +   G +  +GG LV   PKL+ 
Sbjct: 163 PRLIVLVIVALVITAAVYGVVAVIVQMDDVGLRLTQTASRFGQR--IGGGLVAGMPKLLS 220

Query: 238 GLTVVGTAAMFLVGGGIVV-------HNVP--AVHHILEPMLDVVHAWPVVGTLMPTLMN 288
            L+ VG  AM  VGG IV+        + P   VHH+ + +  V  A   +  L+ T   
Sbjct: 221 ALSAVGMGAMLWVGGHIVLVGSDHLGWHAPYRLVHHLDDHL--VGSAGGALTWLVSTAAC 278

Query: 289 GVIGVVAGSLLVAVMEV 305
              G+V G ++VA++ +
Sbjct: 279 AATGLVIGIVVVALVHL 295