Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) from Pseudomonas fluorescens FW300-N2E2

 Score = 63.5 bits (153), Expect = 8e-15
 Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 24/156 (15%)

Query: 239 DLFCGVGGFALHCAAPDTAVTGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQS-- 296
           +L+CG G F L  A     V   EI   ++ +A  +     +DN++   L + + +++  
Sbjct: 209 ELYCGNGNFTLPLATRVRKVLATEISKTSVNAALSNLSENAVDNVTLVRLSAEELTEALN 268

Query: 297 ------QMSAPEL-------VLVNPPRRGLG---SELTAQLEALAPKYILYSSCNPQTMV 340
                 ++   +L       V V+PPR G+     ELT + +      ILY SCNP+T+ 
Sbjct: 269 EVRPFRRLHGIDLKSYEFGSVFVDPPRAGMDPDTCELTRRFD-----NILYISCNPETLA 323

Query: 341 KDIAEL-SSYQMIRVQWFDMFPHTDHAEVLTLLVRK 375
            +IA+L  ++++ R   FD FP T H E   LL R+
Sbjct: 324 ANIAQLHDTHRITRCALFDQFPWTHHMESGVLLTRR 359