Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., tRNA (uracil-5-)-methyltransferase from Pseudomonas stutzeri RCH2

 Score = 73.6 bits (179), Expect = 9e-18
 Identities = 57/186 (30%), Positives = 94/186 (50%), Gaps = 25/186 (13%)

Query: 209 SFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAAPDTAVTGIEIEPEAI 268
           +F Q N +V +++   A   + E     + +L+CG G F L  A     V   EI   ++
Sbjct: 201 AFTQPNGEVCQKMLNWAFEALGE-RDDDLLELYCGNGNFTLPLATRVRRVLATEISKTSV 259

Query: 269 ASAQRSAQMMGIDNLSFAALDSAKFSQS--------QMSAPEL-------VLVNPPRRGL 313
            +A  +    GIDN+    L + + +Q+        +++  +L       V V+PPR G+
Sbjct: 260 NAALANIADTGIDNIELVRLSAEELTQALNEVRPFRRLADIDLKSYDFGSVFVDPPRAGM 319

Query: 314 G---SELTAQLEALAPKYILYSSCNPQTMVKDIAELS-SYQMIRVQWFDMFPHTDHAEVL 369
                ELT + E      ILY SCNP+T+ ++IA+L+ ++++ R   FD FP+T H E  
Sbjct: 320 DPDTCELTRRFER-----ILYISCNPETLAQNIAQLADTHRIERCALFDQFPYTHHMESG 374

Query: 370 TLLVRK 375
            LLVR+
Sbjct: 375 VLLVRR 380