Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., tRNA (uracil-5-)-methyltransferase from Pseudomonas syringae pv. syringae B728a

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 24/156 (15%)

Query: 239 DLFCGVGGFALHCAAPDTAVTGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQS-- 296
           +L+CG G F L  A     V   EI   ++ +A  +    G+DN++   L + + +++  
Sbjct: 211 ELYCGNGNFTLPLATRVRKVLATEISKTSVNAALSNLDDNGVDNVTLVRLSAEELTEALN 270

Query: 297 ------QMSAPEL-------VLVNPPRRGLG---SELTAQLEALAPKYILYSSCNPQTMV 340
                 ++   +L       V V+PPR G+     ELT + E      ILY SCNP+T+ 
Sbjct: 271 EVRPFRRLHGVDLKSYDFGSVFVDPPRAGMDPDTCELTRRFER-----ILYISCNPETLA 325

Query: 341 KDIAEL-SSYQMIRVQWFDMFPHTDHAEVLTLLVRK 375
            +IA+L  ++++ R   FD FP+T H E   LLVR+
Sbjct: 326 ANIAQLHDTHRVERCALFDQFPYTHHMESGVLLVRR 361