Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., RNA methyltransferase from Sinorhizobium meliloti 1021

 Score = 48.5 bits (114), Expect = 3e-10
 Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 5/138 (3%)

Query: 239 DLFCGVGGFALHCA--APDTAVTGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQS 296
           DLF G+G FAL  A  A   AV G +   +A+  A R+ Q +         L        
Sbjct: 277 DLFAGIGTFALRIARTARVHAVEGDDRAVKALDFAARNTQGLKPVTAEKRDLFRRPMMAQ 336

Query: 297 QMSAPELVLVNPPRRGLGSELTAQLEALAPKYILYSSCNPQTMVKDIAELSS--YQMIRV 354
           ++ A + V+ +PPR G  ++   +L     K I   SCNP T+ +D++ L++  Y++  V
Sbjct: 337 ELKAFDAVVFDPPRAGAETQCH-ELARSGVKKIAAVSCNPVTLARDLSILTAAGYRITGV 395

Query: 355 QWFDMFPHTDHAEVLTLL 372
              D F  + H E +  L
Sbjct: 396 TPIDQFLWSAHVETVATL 413