Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., putative RNA methyltransferase from Phaeobacter inhibens DSM 17395

 Score = 55.1 bits (131), Expect = 3e-12
 Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 16/203 (7%)

Query: 176 HMARLEGEEEIFLTETQSLLEHFNDVPMVIRPKSFFQTNPKVAEQLYATARTWVREIAPT 235
           H+ARL  E+E+   E Q+  + F    +   P +F Q        L A  +  V  +   
Sbjct: 211 HIARLTWEDELIGME-QAPTQPFGPAHVCPPPGAFLQATRDGEAALLAAVKDCV--VGAK 267

Query: 236 QMWDLFCGVGGFALHCA--APDTAVTGIEIEPEAIASAQRSAQMMGIDNLSFAALDS--- 290
           ++ DLF G G F L  A  A   AV G      A+ +  R A+  G+  ++    D    
Sbjct: 268 RIVDLFAGCGTFTLPLAKNAEVHAVEGESSMLRALDAGWRQAK--GLKKVTTETRDLFRN 325

Query: 291 ---AKFSQSQMSAPELVLVNPPRRGLGSELTAQLEALAPKYILYSSCNPQTMVKDIAELS 347
              A+      +A ++ +++PPR G  +++T QL     K + Y SCNP T  +D   L+
Sbjct: 326 PLLAEDLNPFGAAFDVAVIDPPRAGAEAQVT-QLVTARTKRVAYVSCNPVTFARDAKILT 384

Query: 348 --SYQMIRVQWFDMFPHTDHAEV 368
              Y++  VQ  D F  + H E+
Sbjct: 385 DGGYRLDWVQVVDQFRWSSHCEL 407