Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., 23S rRNA (uracil(1939)-C(5))-methyltransferase from Klebsiella michiganensis M5al

 Score = 90.9 bits (224), Expect = 6e-23
 Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 15/200 (7%)

Query: 186 IFLTETQSLLEHF---------NDVPMVIRPKSFFQTNPKVAEQLYATARTWVREIAPTQ 236
           ++L     +LEH          + + +V  P+ F Q N  V + +  TA  W+      +
Sbjct: 230 LYLAPQSEILEHIRGEAPWYTSDGLRLVFSPRDFIQVNDGVNQLMVRTALEWLDIQPQDR 289

Query: 237 MWDLFCGVGGFALHCAAPDTAVTGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQS 296
           + DLFCG+G F L  A     V G+E  P  +  A+ +A +  + N++F   +  +    
Sbjct: 290 VLDLFCGMGNFTLPLAKRAAQVVGVEGVPALVVKARENAALNALHNVTFFHENLEEDVTR 349

Query: 297 QMSAP---ELVLVNPPRRGLGSELTAQLEALAPKYILYSSCNPQTMVKDIAEL--SSYQM 351
           Q  A    + VL++P R G  + +   +  LAP+ ++Y SCNP T+ +D   L  + Y +
Sbjct: 350 QAWAKHGFDKVLLDPARAG-AAGVMLHIIKLAPRRVVYVSCNPATLARDSDVLLQAGYTI 408

Query: 352 IRVQWFDMFPHTDHAEVLTL 371
            R+   DMFPHT H E + L
Sbjct: 409 QRLAMLDMFPHTGHLESMVL 428