Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase from Klebsiella michiganensis M5al

 Score =  409 bits (1052), Expect = e-119
 Identities = 204/375 (54%), Positives = 259/375 (69%)

Query: 1   MQCEFFIQKRCTSCHLCAQPYSEQVTNKDQQLRELIAPATDVQWLPPVTSADTAFRNKAK 60
           M C  +   RC SC     P S+Q+ +K   LR L+A A   +W  P    ++ FRNKAK
Sbjct: 1   MHCALYDAGRCRSCQWLELPISQQLADKMADLRALLADAPVAEWCAPACGPESGFRNKAK 60

Query: 61  MVVLGAAHAPILGIEDAQGQPLSLVTCPLYPQPMQELLAYLENWIRIAGIPPYNKLKKKG 120
           MVV G+   P+LG+    G P  L  CPLYPQ    + A L+ +I  AG+ PY+  +++G
Sbjct: 61  MVVSGSVERPLLGMLHRDGAPEDLTDCPLYPQSFAPVFAALKPFIARAGLTPYHVARRRG 120

Query: 121 ELKFILLTRSENSGQFMLRFVARSHAVLERIERNLPTLIAAFPMIEVISVNIQPVHMARL 180
           ELK+ILLT S   G  MLRFV RS   L ++   LP L A  P ++VI+ NIQPVHMA +
Sbjct: 121 ELKYILLTESRLDGGMMLRFVLRSETRLTQLRAALPALQALLPQLKVITANIQPVHMAIM 180

Query: 181 EGEEEIFLTETQSLLEHFNDVPMVIRPKSFFQTNPKVAEQLYATARTWVREIAPTQMWDL 240
           EG +EIFLT+ Q+L E+FN VP+ IRP+SFFQTNP VA +LYATAR WVR++    MWDL
Sbjct: 181 EGPQEIFLTDQQALAENFNGVPLWIRPQSFFQTNPTVASRLYATARDWVRQLPVNHMWDL 240

Query: 241 FCGVGGFALHCAAPDTAVTGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQSQMSA 300
           FCGVGGF LHCA+P+  +TGIEI PEAIA A++SA  +G+ NL F ALDS +F+  +   
Sbjct: 241 FCGVGGFGLHCASPEMRLTGIEIAPEAIACAKQSAAELGLHNLHFQALDSTQFATGEGEI 300

Query: 301 PELVLVNPPRRGLGSELTAQLEALAPKYILYSSCNPQTMVKDIAELSSYQMIRVQWFDMF 360
           P+LVLVNPPRRG+G EL A L  +AP++I+YSSCN +TM KDIA LS Y++ RVQ FDMF
Sbjct: 301 PDLVLVNPPRRGIGDELCAYLSRMAPEFIIYSSCNARTMAKDIARLSGYRIERVQLFDMF 360

Query: 361 PHTDHAEVLTLLVRK 375
           PHT H EVLTLLVR+
Sbjct: 361 PHTAHYEVLTLLVRE 375