Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Klebsiella michiganensis M5al

 Score = 80.9 bits (198), Expect = 5e-20
 Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 19/183 (10%)

Query: 209 SFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAAPDTAVTGIEIEPEAI 268
           SF Q N  +  Q+   A    ++ A   + +L+CG G F+L  A     V   EI   ++
Sbjct: 187 SFTQPNAAMNVQMLEWAIDATKD-ATGDLLELYCGNGNFSLALARNFERVLATEIAKPSV 245

Query: 269 ASAQRSAQMMGIDNLSFAALDSAKFSQSQMSAP---------------ELVLVNPPRRGL 313
           A+AQ +     IDN+    + + +F+Q+                    E + V+PPR GL
Sbjct: 246 AAAQYNIAANHIDNVQIIRMSAEEFTQAMNGVRQFNRLQDIDLKSYQCETIFVDPPRSGL 305

Query: 314 GSELTAQLEALAPKYILYSSCNPQTMVKDIAELS-SYQMIRVQWFDMFPHTDHAEVLTLL 372
            SE    ++A  P+ ILY SCNP+T+ +++  LS ++++ R+  FD FP+T H E   LL
Sbjct: 306 DSETEKMVQAY-PR-ILYISCNPETLCQNLETLSETHEIARLALFDQFPYTHHMECGVLL 363

Query: 373 VRK 375
            +K
Sbjct: 364 TKK 366