Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Enterobacter sp. TBS_079

 Score =  404 bits (1038), Expect = e-117
 Identities = 206/374 (55%), Positives = 251/374 (67%)

Query: 1   MQCEFFIQKRCTSCHLCAQPYSEQVTNKDQQLRELIAPATDVQWLPPVTSADTAFRNKAK 60
           MQC  +   RC SC    QP S+Q+T K   L+ L+A     +W  PV+  +  FRNKAK
Sbjct: 1   MQCALYDAGRCRSCQWIEQPVSQQLTAKMADLQHLLADHAVGEWCAPVSGPEQGFRNKAK 60

Query: 61  MVVLGAAHAPILGIEDAQGQPLSLVTCPLYPQPMQELLAYLENWIRIAGIPPYNKLKKKG 120
           MVV G+   P+LG+   +G P  L  CPLYP     + A L+ +I  AG+ PYN  +K+G
Sbjct: 61  MVVSGSVEKPLLGMLHREGTPEDLTDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRG 120

Query: 121 ELKFILLTRSENSGQFMLRFVARSHAVLERIERNLPTLIAAFPMIEVISVNIQPVHMARL 180
           ELK++LLT S+  G  MLRFV RS A +E++   LP L    P + VI+ NIQPVHMA +
Sbjct: 121 ELKYLLLTESQVDGSMMLRFVLRSEAKVEQLRAALPWLQQQLPQLTVITANIQPVHMAIM 180

Query: 181 EGEEEIFLTETQSLLEHFNDVPMVIRPKSFFQTNPKVAEQLYATARTWVREIAPTQMWDL 240
           EGE EIF TE  +L E FNDVP+ IRP+SFFQTNP VA  LYATAR WVR +    MWDL
Sbjct: 181 EGEREIFFTEQHALAETFNDVPLWIRPQSFFQTNPTVASALYATARDWVRALNIHHMWDL 240

Query: 241 FCGVGGFALHCAAPDTAVTGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQSQMSA 300
           FCGVGGF LHCA PD  +TGIEI  EAIA A++SA  +G+  L F ALDS +F+  Q + 
Sbjct: 241 FCGVGGFGLHCATPDMQLTGIEISAEAIACARQSAAELGLTRLHFQALDSTQFATGQDNV 300

Query: 301 PELVLVNPPRRGLGSELTAQLEALAPKYILYSSCNPQTMVKDIAELSSYQMIRVQWFDMF 360
           PELVLVNPPRRG+G  L   L  +AP YI+YSSCN QTM KDIA L  Y++ RVQ FDMF
Sbjct: 301 PELVLVNPPRRGIGKALCDYLSQMAPDYIVYSSCNAQTMAKDIATLPGYRIERVQLFDMF 360

Query: 361 PHTDHAEVLTLLVR 374
           PHT H EVLTLLV+
Sbjct: 361 PHTAHYEVLTLLVK 374