Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., tRNA (uracil-5-)-methyltransferase related protein from Caulobacter crescentus NA1000

 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 7/176 (3%)

Query: 203 MVIRPKSFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAAPDTAVTGIE 262
           + + P SF Q  P   + +   A    +    +++ DL+CGVG F    A          
Sbjct: 243 VALPPGSFLQAVPAAEKAMVELAVAEAQ--GASRVADLYCGVGTFTFPLAEVAQVYAAEM 300

Query: 263 IEPEAIASAQRSAQMMGIDNLSFAALDSAK--FSQSQMSAPELVLVNPPRRGLGSELTAQ 320
             P   A         G+  ++  A D  +     ++++  ++V+++PPR G  +E T +
Sbjct: 301 SAPAITALKAAIGGAPGLKPITAEARDLVRRPVLSTELAKTDVVVIDPPRAG-AAEQTVE 359

Query: 321 LEALAPKYILYSSCNPQTMVKDIAEL--SSYQMIRVQWFDMFPHTDHAEVLTLLVR 374
           +       +L  SCNPQT  KD   L  + ++++RV   D F  + H E++ +  R
Sbjct: 360 IAKSKVAKVLGVSCNPQTFAKDARVLVDAGFKLVRVTPVDQFVWSPHIELVGVFTR 415