Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., tRNA (uracil-5-)-methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score = 74.3 bits (181), Expect = 5e-18
 Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 21/184 (11%)

Query: 209 SFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAAPDTAVTGIEIEPEAI 268
           SF Q N KVA ++   A   V + +   + +L+CG G F++  A     V   E+   ++
Sbjct: 186 SFTQPNAKVAIKMLEWAID-VTQNSQGDLLELYCGNGNFSIALAQNFNRVLATELAKPSV 244

Query: 269 ASAQRSAQMMGIDNLSFAALDSAKFSQSQMSAPEL---------------VLVNPPRRGL 313
            +AQ + ++  IDNL    + + +FS +                      + V+PPR G+
Sbjct: 245 DAAQYNIEVNNIDNLQIIRMSAEEFSDAMAKKRSFRRLEGIDLDSYVCNTIFVDPPRAGI 304

Query: 314 GSELTAQLEAL-APKYILYSSCNPQTMVKDIAELS-SYQMIRVQWFDMFPHTDHAEVLTL 371
                A LE +   + ILY SCNP T+  ++ +L+ ++++ R   FD FP+TDH E   L
Sbjct: 305 D---PATLELVRGYERILYISCNPDTLKDNLQQLNQTHKVTRFALFDQFPYTDHMETGVL 361

Query: 372 LVRK 375
           L R+
Sbjct: 362 LERR 365