Pairwise Alignments

Query, 365 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., putative transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

 Score =  138 bits (347), Expect = 3e-37
 Identities = 101/349 (28%), Positives = 165/349 (47%), Gaps = 17/349 (4%)

Query: 19  MLMIPVPFVVSLMLLLLAVTLYLR--LAEQAKSACLFLVLCAATTAVVGLRWTVDWSALR 76
           M+ IP+ F+ S  +L L + +      A + +   + ++L A  + ++GLRW  D  A  
Sbjct: 1   MIFIPIEFMFSAQMLFLFIHVVRNDDTANKNRPFLILILLSAVQSFLLGLRWGYDVEATS 60

Query: 77  MAQPILASLIPVAAWCTFTRTHEKGLSRCYKHLSGPILVLVSLLAQPF-WSLPLDEILTA 135
              PILA+L+P   +       E+        L+   L  V ++   F W   +D ++  
Sbjct: 61  YIVPILATLVPALVYAGVLNVVERDRWPMAPRLAVHYLPTVLVIGLTFVWREAVDIVVVV 120

Query: 136 IYLFYGIALVRY--SSQDALRIYVAFNHWENVKRAENIAGWMLLFSALIDSAMSLDFIYN 193
            +L Y + ++R      DAL I    +  E+  RA   A   LL  AL+D+ + L F++ 
Sbjct: 121 TFLSYAVVILRLLLPGTDALGI-TPLDGAESTYRAIFFAALSLLSFALLDTILFLSFMWK 179

Query: 194 QGRFSLYILTVGHVILIPVLAFAVIVVGVSTSSSDEVANLELTTSHEVKETLTDEGMPEA 253
              +   ++   +   + +L  A  +   S S+ +        T  + +    +E   E 
Sbjct: 180 HVEYVPSVILFANFAALVMLGLAATLASNSRSAPE--------TPQQPRRIEEEE---EL 228

Query: 254 RAQEIVALFDRQMREKTHYLDPELTLSKLSRKLGIPAKQISAAVNQVHQKNISKLINEYR 313
                +   +  M E   Y D  L L +L+RK  IP++QIS A+N+    N+S+ +N YR
Sbjct: 229 SGSATIVRIEELMNEGKVYRDANLNLERLARKALIPSRQISQAINRSAGMNVSQYVNGYR 288

Query: 314 IDHALWALTQSDDSITQIFMNSGFQTKSNFNREFSRVTGMTPSEYRKQH 362
           I  A   L  +  S+T I  + GFQTKSNFNREF RVTGMTP  +R ++
Sbjct: 289 IAEACDLLQATRRSVTDIMFDVGFQTKSNFNREFRRVTGMTPQAWRNKY 337