Pairwise Alignments

Query, 365 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 57.4 bits (137), Expect = 6e-13
 Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 11/197 (5%)

Query: 174 WMLLFSALIDSAMSLDFIYNQGRFSLYILTVGHVILIPVLAFAVIVVGVSTSSSDEVANL 233
           W+  F  ++  A+ + F  N G F    L     I+     F +    +   +       
Sbjct: 175 WLRHFLVIL--AVLVVFWINDGIFGEPTLLTAMPIIYTASVFFLSYYAIRQGTVFVFEKK 232

Query: 234 ELTTSHEVKETLTDEGMPEARAQEIVAL------FDRQMREKTHYLDPELTLSKLSRKLG 287
           +L    ++ ET   +  P+     +  L       D  M E+  YLD +L L+ L+ ++G
Sbjct: 233 DLEAVSQIMETPIKQQAPKVSRLSMEQLNAYAQKLDHLMIEEKLYLDNKLNLTMLADRIG 292

Query: 288 IPAKQISAAVNQVHQKNISKLINEYRIDHALWAL-TQSDDSITQ--IFMNSGFQTKSNFN 344
                 S  VN +  +N    IN++R++ A   L T   D +    I   SGF +K+ FN
Sbjct: 293 ASVHDTSFLVNTLKGENFYAFINQWRVEEAKRLLRTGKMDKLNMNGIAFGSGFNSKTAFN 352

Query: 345 REFSRVTGMTPSEYRKQ 361
             F +  G +PS Y KQ
Sbjct: 353 MAFKKYAGCSPSGYIKQ 369