Pairwise Alignments

Query, 365 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., helix-turn-helix transcriptional regulator from Pantoea sp. MT58

 Score =  174 bits (440), Expect = 4e-48
 Identities = 112/350 (32%), Positives = 186/350 (53%), Gaps = 16/350 (4%)

Query: 19  MLMIPVPFVVSLMLLLLAVTLYLRLAEQAKSACLFLVLCAATTAVVGLRWTVDWSALRMA 78
           ML +P P +  L L LL  T++         A  FL  C    ++  +RW  D   LR  
Sbjct: 1   MLSVPFPVITLLALFLLMATVFSGKPCN-NGALRFLSACIILVSLNTIRWEYDSHFLRDL 59

Query: 79  QPILASLIPVAAWCTFTRTHEKGLSRCYKHLSGPILVLVSLLAQPFWSLPLDEILTAIYL 138
           Q ++A L+P  AW +F   ++    R +      + VLVSL  +  W+   D IL+ ++ 
Sbjct: 60  QSVMAMLLPAIAWHSFVPLNDN--KRKHDLFVMIVPVLVSLAIRLVWAPATDFILSLLFF 117

Query: 139 FYGIALVRYSSQDALRIYVAFNHWENVKRAENI---AGWMLLFSALIDSAMSLDFIYNQG 195
            YG+ L++ +  +  ++   FN  + + +  ++   AG  L  SAL D  +++DF  + G
Sbjct: 118 SYGVGLLKKAFVNEQKL--KFNRLKEIPQQASLTFFAGSFLCLSALTDLLIAIDFDISGG 175

Query: 196 RFSLYILTVGHVILIPVLAFAVIVVGVSTSSSDEVANLELTTSHEVKETLTDEGMPEARA 255
           + +  I+ +  ++L+P++   VI+     S      ++      + K+T TDE  P A  
Sbjct: 176 KHAALIILITQLLLLPIVG--VIIYNFINSHQQFEPDIR-----QEKDT-TDEKAPAADM 227

Query: 256 QEIVALFDRQMREKTHYLDPELTLSKLSRKLGIPAKQISAAVNQVHQKNISKLINEYRID 315
            E+  + ++++ E   YLDP LTL+ L+RK G+PA+  SAAVN V Q N+S+ IN +R++
Sbjct: 228 TELYIVLEKKIHESELYLDPNLTLALLARKTGVPARNFSAAVNSVKQCNVSQWINGFRVE 287

Query: 316 HALWALTQSDDSITQIFMNSGFQTKSNFNREFSRVTGMTPSEYRKQHRQN 365
            A   L  +   +T I + SGF TKSNFNREF R++G++P  +R+Q   N
Sbjct: 288 RAKELLLSTSLPVTHIMLESGFMTKSNFNREFQRLSGLSPRLFRQQALDN 337