Pairwise Alignments

Query, 605 a.a., flavodoxin from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., GbcB Glycine betaine demethylase subunit B from Pseudomonas fluorescens FW300-N2E2

 Score =  185 bits (469), Expect = 3e-51
 Identities = 113/344 (32%), Positives = 168/344 (48%), Gaps = 22/344 (6%)

Query: 284 CVEREEIARDFVTFWLEPTQEIATQYFPGQYLPIEMVIEGEPVQRYYTLSSSPSRPGRLA 343
           CV+  +   D  TF     Q I   + PGQ++ +E+ IEG+P+ R YT+SSSPS P   +
Sbjct: 45  CVKVIQETWDVRTFCFMADQPIMFFFKPGQFVTLELEIEGQPIMRSYTISSSPSVPYSFS 104

Query: 344 ISVKRIDGGRVSNWLQENLQIGTTLTAQHPTGHFHLDTTALQPLLLLSAGSGVTPMLSML 403
           +++KR+ GG+VSNWL + L  G  L    P G F+        +L LS G G+TP +SM 
Sbjct: 105 VTIKRVPGGKVSNWLHDTLHEGQELAVHGPVGLFNAIDFPSPKVLYLSGGVGITPCMSMA 164

Query: 404 RYLADHNQLDDVVFYHQCRSEQDIPCQAELDALAKQ--HAGLTLIYALTQPSPQWQGEQG 461
           R+  D N   D+ F H  RS +DI    EL+ +A +  +  L LI         W G +G
Sbjct: 165 RWFYDTNANVDMTFIHSARSPKDIIYHRELEHMASRIDNFSLHLICEKHGLGEPWAGYRG 224

Query: 462 RLSLSHIK-RIPNLVSRQVFVCGPDGFMQKAKNLLLKQGVAESAYHQEAFGTL------- 513
            L+   ++  +P+ + R+VF CGP  +M   K LL   G     YH+E+FG         
Sbjct: 225 YLNHKMLELMVPDFLEREVFCCGPTPYMTAVKRLLEAAGYDMKRYHEESFGATPPEARAD 284

Query: 514 ------------QVAPREKKAVTLSFNGIQVSADNQKTLLEHAEDAGVRIPNSCRAGICG 561
                       +V   +   V  + +G  +     +T+   A   G+ IP +C  GICG
Sbjct: 285 AVEQAEQAADAPEVDAADLHLVEFTSSGKSIRVGPGETVHAAAAKLGMMIPKACGMGICG 344

Query: 562 ACKVKVKSGLVEQPKVPALMDHERSMGMALACCSVANTDLDVEF 605
            CKV    G VE      + + + + G  L+CCSV   D+ +EF
Sbjct: 345 TCKVLKLGGEVEMDHNGGITEDDEAEGYILSCCSVPKGDVRIEF 388